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Understanding the effect of the ligand density and pore size on the protein binding capacity of affinity membranes. Verónica Forbes Sánchez Department of Chemistry Dr. Vibha Bansal

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Page 1: Vero feb2015

Understanding the effect of the ligand density and pore size on the protein binding capacity of affinity membranes.

Verónica Forbes Sánchez

Department of Chemistry

Dr. Vibha Bansal

Page 2: Vero feb2015

Objectives1. To study the effect of ligand density

on protein binding capacity of affinity modified membranes.

2. To study the effect of pore size on protein binding capacity of affinity modified membranes.

Page 3: Vero feb2015

Why we are using membrane?

▫Help to overcome the diffusion resistance▫High pressure drop▫Lower cost of production▫Reusable▫Highly accessible surface area

Page 4: Vero feb2015

Affinity membraneIn the processes of making available new membrane for separation processes few things need to be considered:

Type of membraneLength of spacer armType of ligand

Page 5: Vero feb2015

Pore size and Ligand densityDirectionally proportional relationship between ligand

density and the protein binding capacity??Higher ligand density more binding site available for

proteins1.Ligand density in turn depends on pore size which is also

known to affect the dynamic binding capacity of the membrane2.

Researchers concluded that for a given protein, the ligand density and the pore size need to be optimized.

1. Fogle, J.; Mohan, N.; Cheung, E.; Persson, J. Journal of Chromatography A 2012, 1225, 62.2. Francis, P.; von Lieres, E.; Haynes, C. Biotechnology and bioengineering 2012, 109, 615.

Vibha Bansal
add references from proposal for each statement
Vibha Bansal
insert carrtoon showing two mmebranes with different sized pores
Veronica M
This reference are the ones?Is ok to put them in here?
Vibha Bansal
Veronica M
I made the cartoons are in the next slide, I found a picture but I don't know if we are allow to put them in the presentation. Also the objective is only one I can leave the two?
Page 6: Vero feb2015

Pore size and Ligand density

Membrane large pore size

Membrane smaller pore size

Page 7: Vero feb2015

Overview of project

Synthesis of membranes

Modification of membrane

Application to protein binding

Vibha Bansal
make a scehme 1. Synthesis of membranes (Otano). 2. Modification of membranes (Fasoli). 3. Application to protein binding (Bansal)
Veronica M
This is ok or you wanna a diffrent scehme?
Page 8: Vero feb2015

Membrane design: PABA linked RC membrane

NH

Vibha Bansal
we will use paba so change the cartoon
Veronica M
Is the same syntesis but instead we're using PABA? So I can't use the one that is already in the proposal? I'm really confused about the syntesis.
Page 9: Vero feb2015

Methodology: Application of affinity ligand to modified membrane to

isolation of PA.

PA Binding

Equilibrium

Washes

Vibha Bansal
methodology for what???
Vibha Bansal
I really don't understand whta you are talking abt here..separation or ligand determination???
Veronica M
This is the part E. in the proposal. Because we're using a multicomponent solution or am I wrong???Or we're not doing the isolation for this semester? If we're going to do isilation and you don't like this I have another one that is more simple and more concrete
Veronica M
In the other slide do I need to put also the last wash with water
Page 10: Vero feb2015

Elution

Regeneration

Regeneration

Methodology: Application of affinity ligand to modified membrane to

binding of PA.

Analytical methods

Page 11: Vero feb2015

Analytical Methods

1Smith, 2005. Nat. Methods 2: 712Johnsen, et al., 1999. Infect. Immun. 67: 1072

Procedures ObjectiveAbsorbance at 280 nm To determine which of

the eluted fractions have protein.

Protein Estimation1

-BCA MethodTo determine the

amount of protein in sample.

Enzyme Activity2

-Chromogenic Assay

To measure the quantity of active

enzyme in a sample.

Electrophoretic Analysis

Page 12: Vero feb2015

Acknowledgement• Vibha Bansal Ph.D• Ezio Fasoli Ph.D and his lab. • Rise program• NIH-INBRE• Dept. of Chemistry, UPR-Cayey

Page 13: Vero feb2015

Questions

Page 14: Vero feb2015

Understanding the effect of the ligand density and pore size on the protein binding capacity of affinity membranes.

Verónica Forbes Sánchez

Department of Chemistry

Dr. Vibha Bansal